Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905929.1_cds_XP_016456217.1_50076
CDS Infomation

[gene=LOC107780196] [db_xref=GeneID:107780196] [protein=EGF domain-specific O-linked N-acetylglucosamine transferase-like] [protein_id=XP_016456217.1] [location=complement(join(9988..11285,11984..12055,12137..12311))] [gbkey=CDS]
Sequence

ATGTGCAAGAAAATGATGCATTATAAGAGATATCAGCACTGGAATAAAAAAGAAGATGTG
TTTGTGGTTTGTGTAGATGAAGAACTAAACTCTGGTTATAATTGCAAAAGAGCTAAACCA
AAACTTTTTTACCTTCTTTTCCTTTCTTTCATCTCTTTCAGCTTTATTTTCTTGTATTCA
TTTCGTTCTGAAGAAGCAGGACTTGTTCCTAAAACAGATATAAATTCTTGTTCCTCTGTC
TCTAACGGGACAATTTGTTGTGAAAGAAGCAGTATTCGCTCCGATGTATGTGTTATGAAA
GGTGTTGTTAGGACAGATTCTGCTTCCTCTAGAATTACCCTTTACAAAAACAATGGTCAT
AGCGATTATGTGTTGCGCGATACTGATGAGAATGACGAGGTACTTCAGCATGAAAAGATT
AGGCCGTATACTCGGAAATGGGAAAAGAATGTGATGGATACCATTGATGAGTTAGACCTT
GTTGTGAAAGGGAAGCATTATGGCGTTCGCCAAAAGTGTGATGTCGAACATGATGTGCCC
GCTGTGTTTTTCTCTACTGGAGGTTATACCGGAAATCTCTACCACGAGTTCAACGATGGA
CTCTTGCCCCTTTACATCACTTCTCAGCAGTTCAACAAGAAGGTTGTGTTTGTAATCCTT
GAGTACCATAATTGGTGGATAATGAAGTACGAGAACGTTCTTCCTCACCTCACTGAATAT
CCTATTATAGACTTTAGCGGAGATAAGAGGACTCATTGCTTCCCTGAAGCTATAGTTGGT
TTAAGAATCCACGATGAGCTAACTGTTGATCCTTCATTGATGGGAAACAATAAGACGATT
AGAGATTTCAGAGACCTTCTGGACCGAGCTTATTGGCCTCGAATTAGAGGTTTGATCCAA
GATGAGGAACGTGAAGCTCGGATGAATAAAGAAAAACTTATTTCGTCACCCTCATCTGAG
TTAAAGATGGTGACGACGGAAGAAAAGAAGGATTTGAAGAAGCCTAAAGTGGTCATAATA
GCGAGAAATGATTCTAGAGCTATAATGAACGAAGATTCTTTGGTTAAAATGATCGAAGAT
ATTGGGTTTCGTGTAGAAGTTTTGAGGCCACAACGAACGACAGAGCTTGCAAGGATCTAT
CGAGTCCTTAATTCGAGTGATGTTATGATAGGAGTTCACGGTGCTGCCATGACTCATTTC
CTCTTTATGAGGCCTGGTTCTGTTTTCATCCAAATCATTCCCCTCGGAACAGATTGGGCA
GCAGGCACTTATTATGGAGAACCAGCAGTCAAACTAGGTCTCAAGTACATCGGATACAAA
ATTCTTCCGAAAGAGAGCTCCTTGTATGATGAGTACGATAAGAATGATCCCGTCCTGATG
GACCCCAACAGCGTGAACGACAGAGGATGGGAATTCACGAAAAGGATCTACCTTGATCAT
CAGAATGTGAGGTTGAATCTTGGAAGGTTTCGTAAAAGATTGCTTCGCGCCTACAATCAT
TCTGTTGCTAATGAAAATGAGCGCCTTCGTCGTCAAAGTCAGTAA

Peptide Sequence

PEP ID

XP_016456217.1
PEP Infomation

PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase-like [Nicotiana tabacum]
Sequence

MCKKMMHYKRYQHWNKKEDVFVVCVDEELNSGYNCKRAKPKLFYLLFLSFISFSFIFLYS
FRSEEAGLVPKTDINSCSSVSNGTICCERSSIRSDVCVMKGVVRTDSASSRITLYKNNGH
SDYVLRDTDENDEVLQHEKIRPYTRKWEKNVMDTIDELDLVVKGKHYGVRQKCDVEHDVP
AVFFSTGGYTGNLYHEFNDGLLPLYITSQQFNKKVVFVILEYHNWWIMKYENVLPHLTEY
PIIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMGNNKTIRDFRDLLDRAYWPRIRGLIQ
DEEREARMNKEKLISSPSSELKMVTTEEKKDLKKPKVVIIARNDSRAIMNEDSLVKMIED
IGFRVEVLRPQRTTELARIYRVLNSSDVMIGVHGAAMTHFLFMRPGSVFIQIIPLGTDWA
AGTYYGEPAVKLGLKYIGYKILPKESSLYDEYDKNDPVLMDPNSVNDRGWEFTKRIYLDH
QNVRLNLGRFRKRLLRAYNHSVANENERLRRQSQ

Transcript Sequence

Gene sequence data has not been registered.